Processor

1. commons-io

Description: Utility classes for IO. The commons-io was released in Apr 22, 2016 by Apache. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 2.6 License: Apache 2.0 Link: http://commons.apache.org/proper/commons-io/ Full license text: http://www.apache.org/licenses/LICENSE-2.0.txt

2. commons-math-3

Description: The Apache Commons Math project is a library of lightweight, self-contained mathematics and statistics components addressing the most common practical problems not immediately available in the Java programming language or commons-lang. The commons-math-3 was released in Mar 17, 2016 by Apache. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 3.6.1 License: Apache 2.0 Link: http://commons.apache.org/proper/commons-math/ Full license text: http://www.apache.org/licenses/LICENSE-2.0.txt

3. csv2fcs

Description: Conversion from CSV to FCS file format. The csv2fcs was released in Jul 10, 2012 by Broad Institute. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 4.0 License: GNU LGPL Link: https://sourceforge.net/projects/flowcyt/files/GenePattern Flow Cytometry Suite/ Full license text: http://www.gnu.org/licenses/lgpl-2.1.txt

4. Gson

Description: Gson is a Java library that can be used to convert Java Objects into their JSON representation. It can also be used to convert a JSON string to an equivalent Java object. Gson can work with arbitrary Java objects including pre-existing objects that you do not have source-code of. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 2.8.5 License: Apache 2.0 Link: https://github.com/google/gson Full license text: http://www.apache.org/licenses/LICENSE-2.0.txt

5. ImageJ

Description: Open source Java image processing program. The ImageJ was released in Sep 22, 2016 by NIH. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 1.52i Link: http://imagej.net/ License: Public Domain

6. JCuda

Description: Java bindings for NVIDIA CUDA. The JCuda was released in Jun 21, 2018 by Marco Hutter. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 0.9.2 License: MIT Link: http://jcuda.org/ Full license text: http://opensource.org/licenses/mit-license.html

7. JavaCPP

Description: The missing bridge between Java and native C++. The JavaCPP was released in Jul 11, 2015 by ByteDeco. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 1.0 License: Apache 2.0, GPLv2 with Classpath exception, GPL 2.0 Link: http://bytedeco.org/javacpp/ Full license text (1): http://www.apache.org/licenses/LICENSE-2.0.txt Full license text (2): http://www.gnu.org/software/classpath/license.html Full license text (3): http://www.gnu.org/licenses/gpl-2.0.txt

8. imglib-ij

Description: ImgLib display logic using ImageJ. The imglib-ij was released in Dec 26, 2012 by MPI-CBG. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 2.0.0-beta6 License: GPL 2.0 Link: http://fly.mpi-cbg.de/~saalfeld/Projects/ Full license text: http://www.gnu.org/licenses/gpl-2.0.txt

9. MIST

Description: Image registration for tile stitching using JCuda. The MIST was released in Sep 24, 2018 by NIST. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 2.0.0 License: Public Domain Link: https://pages.nist.gov/MIST/

10. Microvolution

Description: GPU deconvolution. The Microvolution was released in Oct 2016 by Microvolution. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: akoya_2019.03 License: Commercial Link: https://www.microvolution.com/

11. opencsv

Description: A simple library for reading and writing CSV in Java. The opencsv was released in Aug 12, 2017 by Opencsv. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 4.4 License: Apache 2.0 Link: http://opencsv.sf.net Full license text: http://www.apache.org/licenses/LICENSE-2.0.txt

12. ParallelColt

Description: Parallel Colt is a multithreaded version of Colt - a library for high performance scientific computing in Java. It contains efficient algorithms for data analysis, linear algebra, multi-dimensional arrays, Fourier transforms, statistics and histogramming. The ParallelColt was released in Oct 10, 2018 by Piotr Wendykier. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose.

Version: 0.11.4 License: CERN Public License, Gnu LGPL Link: http://sourceforge.net/projects/parallelcolt/ Full license text (1): http://acs.lbl.gov/software/colt/license.html Full license text (2): http://www.gnu.org/licenses/lgpl-2.1.txt

14. t-SNE Java

Description: Java implementation of t-SNE clustering algorithm (Barnes Hut). The T-SNE Java was released in 25 Mar, 2018 by Leif Jonsson. This software is provided "as is" without express or implied warranty, and with no claim as to its suitability for any purpose. Version: 2.5.0 Link: https://github.com/lejon/T-SNE-Java License: None specified.