CODEX® Support
Search…
Welcome
CODEX® Instrument Manager (CIM)
Overview
User Instructions
Microscope Specific Settings
Technical Notes
Installation
CODEX® Processor
Overview
Installation
Install
Update
Version History
User Instructions
Technical Notes
Troubleshooting
CODEX® Multiplex Analysis Viewer (MAV)
Overview
Installation
User Instructions
Technical Notes
Public Datasets
Troubleshooting
Workflow Documents
CODEX and microscope setup
Reagents and staining
Appendix
End User License Agreement
Third-party Licenses
PhenoCycler Analysis
Powered By
GitBook
Version History
Version
Date
Major Changes
1.7.0.6
2020-01-27
Added image analysis report
Added dataset integrity validation
Added run name Added region preview
Switched to OpenJDK
1.6.0.16
2019-10-18
Fixed EDF focal map issues
Added EDF to main pipeline Added diagnostic output
Added t-SNE
1.5.0.48b
2019-07-30
Fixed tile registration for multi-regions
1.5.0.48
2019-07-22
Added extended depth of field (EDF) stitching Fixed deconvolution brightness scaling
Fixed shading correction dependency
1.5.0.46
2019-06-11
Reduced deconvolution and shading correction memory use
1.5.0.45
2019-06-04
Added sub-sampling for tile registration
Added full brightness compensation for deconvolution
Added compression to prevent additional saturation
1.5.0.44
2019-05-22
Restored and added additional background subtraction modes 1) min-min-max, 2) min-min-empty and 3) min-min-max-empty
1.5.0.43
2019-05-14
Added support for new version of Microvolution, akoya_2019.03
1.5.0.42
2019-04-16
Added support for Keyence timestamped cycle folders
1.5.0.40
2019-04-12
Added support for min-min-empty background subtraction
1.5.0.39
2019-03-27
Fixed reading segmentation.json
1.5.0.38
2019-03-20
Fixed diagnosis output exception check
1.5.0.36
2019-01-15
Codified experiment.json format
1.5.0.32
2018-12-27
Added new background subtraction algorithm
Improved tile registration
Added support for sub-tile best focus
Added processing time estimate
1.5.0.30
2018-10-22
Improved multi-threading and resource prioritization
Improved dataset scanning
Improved installer
Added diagnostic output and default placeholder channel names
1.5.0.25
2018-09-25
Initial release
Previous
Update
Next - CODEX® Processor
User Instructions
Last modified
2yr ago
Copy link