CODEX® Multiplex Analysis Viewer (MAV) is an ImageJ plugin used to visualize, annotate and analyze cell populations using CODEX® image and segmentation data.
Load and display experiment image data, including its various regions, markers and z-slices
Provide an interface for hierarchical biaxial gating and KNN/FLANN clustering
Allow for versatile population management to combine and re-cluster cell populations
Visualize populations on region images and marker expressions in an intuitive heatmap
Generate voronoi diagram for visualization and computation of neighboring populations
Import and export annotated populations and analysis states